BLASTN 2.11.0+


Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb
Miller (2000), "A greedy algorithm for aligning DNA sequences", J
Comput Biol 2000; 7(1-2):203-14.



Database: Dcitr_OGSv2.0_rna.fa
           25,292 sequences; 49,157,538 total letters



Query= NODE_6494

Length=310
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

DcitrM041050.1.1JNK-interacting protein 1 (AHRD V3.11 *** tr|A0A0...  516     5e-146


>DcitrM041050.1.1 JNK-interacting protein 1 (AHRD V3.11 *** tr|A0A0M9ABH9|A0A0M9ABH9_9HYME). 
Similar to MCOT07739.0.MT. AED 0.03
Length=1583

 Score = 516 bits (279),  Expect = 5e-146
 Identities = 291/297 (98%), Gaps = 0/297 (0%)
 Strand=Plus/Minus

Query  14    ATGTATTTGTTTTTTGTTCTTTTTTTTTCCACCGAATATTGCAATGGTGAAGGTTTTTTA  73
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct  1534  ATGTATTTGTTTTTTGTTCTTTTTTTTTCCACCGAATATTGCAATGGTGAAGGTTTTTTA  1475

Query  74    TACCAATATCTTTTAAAAATATGTAATTGTGAACAGACGTTCAATAAAATAACTATTTTG  133
             ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||
Sbjct  1474  TACCAATATCTTTTAAAAATATGTAATTGTGAACAAACGTTCAATGAAATAACTATTTTG  1415

Query  134   AGTGAACAATTCAGGCAAGAATCGTTAGCGCTTGGGTGGGAATTCGAACCCGCGCCCTCT  193
             ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct  1414  AGTGAACAATTCAGGCAAGAATCGTTACCGCTTGGGTGGGAATTCGAACCCGCACCCTCT  1355

Query  194   AATTTACAAGGCGAGCAATCTCTTCGTTGTCTTGGGACATCTAAGAACCGTTGTGCGTCG  253
             |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct  1354  AATTTACAAGGCGAGCAATCTCTTTGTTGTCTTGGGACATCTAAGAACCGTTGTGCGTCG  1295

Query  254   CTTACTATTTCTGACGCGACGTCAAATAACCCTTATACCTACATCCATGAAAAATAA  310
             ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct  1294  CTTACTATTTCTGACGCGACGTCAAATAACCCTTAGACCTACATCCATGAAAAATAA  1238



Lambda      K        H
    1.35    0.627     1.14 

Gapped
Lambda      K        H
    1.28    0.460    0.850 

Effective search space used: 13885451580


  Database: Dcitr_OGSv2.0_rna.fa
    Posted date:  Mar 4, 2018 10:37 PM
  Number of letters in database: 49,157,538
  Number of sequences in database:  25,292



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5